PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_060900_tcwq.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 334aa    MW: 37057.7 Da    PI: 6.1904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_060900_tcwq.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.5e-09178225455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN ++  L+el+P +    +k    a +L + ++++++Lq
  Bv3_060900_tcwq.t1 178 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQYLQ 225
                         8*************************9....899999*************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-15172243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.91E-8172229No hitNo description
Gene3DG3DSA:4.10.280.105.1E-15174242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.437174224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-6178225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-7180230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MDSIAGTEIR SVNYPEFGDE FQKLIIAPEN GNSFTALLEL PPTQAMELLT DDGGGGNGGG  60
EVVKRHRVSA YNHSLSSLPA FPSNRALIER AAKYSVFATE DSPEFKVKSE PLDSCSNPNS  120
SDPTAGSESD KEKEKPLKRK EREKKGKGLT KKTKTTSDDG EKLPYVHVRA RRGQATDSHS  180
LAERARREKI NARMKLLQEL VPGCNKISGT ALVLDEIINH VQYLQRQVEY LSMRLAAVNP  240
KIDFNLDSLI SGGTESMVDC NLPNMAMPLM WPEIHVTGDR PQFQQQWQLE SLSQPVWVKE  300
ENNRNVVASE NSLMTYDSPG NSASLHSSQL KMEL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672733.10.0PREDICTED: transcription factor bHLH48
SwissprotQ3EAI13e-79BH060_ARATH; Transcription factor bHLH60
TrEMBLA0A0J8FHK30.0A0A0J8FHK3_BETVU; Uncharacterized protein
STRINGGLYMA19G32570.11e-117(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.24e-86bHLH family protein